BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G01SP1|AL428771
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 1688 0.0
>3x_Contig1690
Length = 13018
Score = 1688 bits (847), Expect = 0.0
Identities = 854/861 (99%)
Strand = Plus / Plus
Query: 1 acacaatttaatctttcaccacaatcgtataccgcaacttgatccctagtcttcatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 acacaatttaatctttcaccacaatcgtataccgcaacttgatccctagtcttcatgtcc 1788
Query: 61 caaacgacaattcttccatcagatccgattgtaactaaataatgaccaaacttgttatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1789 caaacgacaattcttccatcagatccgattgtaactaaataatgaccaaacttgttatgg 1848
Query: 121 taaaattgaaagtcctttacacggttactgtgacccaatagtgaaaattcagcttccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1849 taaaattgaaagtcctttacacggttactgtgacccaatagtgaaaattcagcttccaac 1908
Query: 181 ttaggtgattcttcctcttcatctggcacttcttcgtaaagttttgatgctttccagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1909 ttaggtgattcttcctcttcatctggcacttcttcgtaaagttttgatgctttccagaat 1968
Query: 241 tgaacggcaccactgttcaatccaacaacaatatactcttcgccatcaatgatttcacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 tgaacggcaccactgttcaatccaacaacaatatactcttcgccatcaatgatttcacgc 2028
Query: 301 tctagatgcatcaatgtattcctgctaaaatcgatttctctatgcacctttgctgtttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 tctagatgcatcaatgtattcctgctaaaatcgatttctctatgcacctttgctgtttcg 2088
Query: 361 gtcttgaaaatkagcaatttgttcaacaaaccaacagcaatatacgacccattctccccg 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 gtcttgaaaattagcaatttgttcaacaaaccaacagcaatatacgacccattctccccg 2148
Query: 421 caccatctaacgaactgtccgttttgattatatttccttagtttcaatacacctgccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2149 caccatctaacgaactgtccgttttgattatatttccttagtttcaatacacctgccttc 2208
Query: 481 ttaacagtcatgaggttccataatctgatcgaatgakcttcacttacactgactgcract 540
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 2209 ttaacagtcatgaggttccataatctgatcgaatgatcttcacttacactgactgcaact 2268
Query: 541 ctgttcgaaggatgaatatcgaaatcgttgatcctggcagtatggcccttcaaggttccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 ctgttcgaaggatgaatatcgaaatcgttgatcctggcagtatggcccttcaaggttccg 2328
Query: 601 aaattttcccagtctttcactctccatactatkatktkatgakcctcagatgcagatagt 660
|||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||
Sbjct: 2329 aaattttcccagtctttcactctccatactattattttatgatcctcagatgcagatagt 2388
Query: 661 agccatttattgagttggatatcctggccatcggcatctttacctcttgagaatctcaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2389 agccatttattgagttggatatcctggccatcggcatctttacctcttgagaatctcaaa 2448
Query: 721 ttcgtaatggaaccttgatgtcctaacaacgtccccaattctttacgtttttgtaaatcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 ttcgtaatggaaccttgatgtcctaacaacgtccccaattctttacgtttttgtaaatcg 2508
Query: 781 tagattcttatattttcatcgttcgatcctgatactaggtatctctttgatatgtctaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 tagattcttatattttcatcgttcgatcctgatactaggtatctctttgatatgtctaga 2568
Query: 841 catttcacactcaatgagtgc 861
|||||||||||||||||||||
Sbjct: 2569 catttcacactcaatgagtgc 2589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6187
Number of Sequences: 1807
Number of extensions: 6187
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)